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OCR Biology A - 6.2.1 - Cloning and Biotech Part 2

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This deck Continuous culture has a higher risk of contamination, which can stop production entirely.

Disadvantages of continuous culture

Contamination is more likely

Difficult to maintain and control product consistency

In cases of contamination losses are great and all production halts

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Key Terms

Term
Definition

Disadvantages of continuous culture

Contamination is more likely

Difficult to maintain and control product consistency

In cases of contamination losses are great and all p...

Advantages of batch culture

Less likelihood of contamination

Can be left for a set time period

Useful for secondary metabolites

In the event of contamination...

Disadvantage of batch culture

Fermenter isn't in use constantly - less efficient

| Time spent cleaning

Primary metabolites

Produced in the course of normal metabolism e.g. proteins, enzymes, alcohol

Produced in lag and log phase

Secondary metabolites

Produced after main population growth has occurred, nutrients are in short supply and population isn't growing rapidly

Produced in stationary...

How do fermenters maximise the yield

Tube for sterile air to provide oxygen for aerobic reactions

Sparger - diffuses air through culture medium

Powerful motors - mixes cont...

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TermDefinition

Disadvantages of continuous culture

Contamination is more likely

Difficult to maintain and control product consistency

In cases of contamination losses are great and all production halts

Advantages of batch culture

Less likelihood of contamination

Can be left for a set time period

Useful for secondary metabolites

In the event of contamination, only one batch is lost

Disadvantage of batch culture

Fermenter isn't in use constantly - less efficient

| Time spent cleaning

Primary metabolites

Produced in the course of normal metabolism e.g. proteins, enzymes, alcohol

Produced in lag and log phase

Secondary metabolites

Produced after main population growth has occurred, nutrients are in short supply and population isn't growing rapidly

Produced in stationary and death phase

How do fermenters maximise the yield

Tube for sterile air to provide oxygen for aerobic reactions

Sparger - diffuses air through culture medium

Powerful motors - mixes contents ensuring equal distribution of nutrients and so microbes don't settle at base of fermenter

Acid-base injection site - controls pH

Culture broth - contains sources of carbon and nitrogen (NH3) and vitamins/minerals

Jacket - filled with hot/cold water to provide optimum temp as respiration releases heat (denaturing)

Asepsis in fermenters

Washing. disinfecting and steam cleaning all equipment

Using fermenter made of polished stainless steel so microbes cant stick

Sterilising all nutrients w/ steam or heat

Only bubbling in sterile air- v. fine filters

Phases in microorganim growth curves (bacteria/fungi)

Lag

Exponential

Stationary

Death

Lag phase

Reproduction v. slow as cells acclimitase, absorb nutrients

Gene expresion for spp enzymes

Synthesis of enzymes and organelles

Exponential phase

Reproduction is rapid

No limiting conditions

Few cells die

Stationary phase

Population remains constant as death and reproduction rates are the same

Death phase

Lack of resources

| Build up of CO2 - fatal

Culture

A method of multiplying microbial organisms by letting them reproduce in predetermined culture medium under controlled lab conditions

Isolated enzymes

Taking enzymes out of microorganism

Issue w/ isolated enzymes

Product must be seperated from enzymes and extraction is v. expensive

Immobilised enzyme

Enzymes fixed to a surface and do not freely mix w/ the substrate

Ways to immobilise enzymes

Covalent bonding

Encapsulation

Adsorption

Entrapment

Covalent bonding to immobilise enzymes

Covalently bonded to a supporting surface

| Enzymes are also covalently bonded together using a cross-linking agent

Adsorption

Bound to supporting surface by a combination of hydrophobic interactions and ionic links

Bound w/ active site exposed and accessible to substrate

Entrapment

Trapped in a matrix (often calcium alginate beads) that doesn’t allow free movement

Encapsulation/membane separation

Separated from reaction mixture by a small permeable membrane - microcapsule

A vs D of adsorption

Simple and cheap

Can be used in a variety of processes

Enzymes v. accessible

May distort active site

Enzymes can detach and leak into reaction mixture

A vs D of covalent bonding

Enzyme less likely to become detached

pH and substrate conc have little effet on enzyme activty

Accessible to substrate

Expensive

Can distort active site, reducing activity

A vs D of encapsulation

Relatively simple

Relatively small effect on enzyme activity

Widely apllicable to diff processes

Expensive

Substrate and product has to be small in order to diffuse through partially permeabe membrane

Diffusion is slow

A vs D of entrapment

Widely applicable to diff processes

May be expensive

Difficult to entrap

Effect of entrapment on enzyme activity dpends on the matrix

Substrate and product needs to be small

Examples of immobilised enzymes

Glucose isomerase

Penicillin acylase

Lactase

Aminoacylase

Glucoamylase

Nitrile hydratase

Penicillin acylase

Converts naturally produced penicillins to semi-synthetic penicillins

Some resistant microorganims arent resistant to semi-synthetic penicillins

Glucose isomerase

V. commonly use to produce HFCS, sweeter than sucrose and can be used in diet fods

Glucose ---> fructose

Lactase

Hyrolyses lactose into glucose and galactose so lactose-intlerant people can drink milk and reduce the risks of developing osteoporosis as a lack of calcium

Aminoacylase

N-acyl-amino acids ---> pure sample of L-amino acids

| Used in synthesising pharmaceutical compounds

Glucoamylase

Dextrins ---> glucose

| Immobilised and used to digest sources of starch e.g. corn and cassava

Nitrile hydratase

Nitriles ---> amides

Acrylamide can be polymerised to form a plastic and a gel for electrophoresis

Used to treat water, helps to stick many small contaminanrts together so they can be filtered out

Supporting surfaces

Glass

Porous carbon

Clay

Advantages of immobilising enzymes

Lowers temp required

No contamination of end product

Reusable

Protected by immobilisng matrix so high temp or extreme pH has no effect

Disadvanages of immobilising enzymes

Expensive to set up

Bonding may affect active site

Contamination is v. costly as whole system needs to stop

Slower process as enzymes and substrates don't mix freely

Making yoghurt

Milk is fermented by bacteria

Lactose---> lactic acid

Low pH denatures caesin, causing milk to coagulate and thicknes

Also adds flavour

Makng cheese

Milk is fermented by bacteria

Lactose --> lactic acid, acidifies milk

Rennin coagulates caesin in the presence of Ca2+

Resulted curd separates from liquid whey by curdling, stirring and heating

Microorganisms in baking

Flour is mxed w. water, salt and yeast

| Respires anaerobically and produces CO2 bubbles, causing the dough to rise

Making wine

Grapes have yeast on the surface

| When crushed uses glucose and fructose to respire and produce CO2 and alcohol

Making beer

Uses malted barley grains that are beginning to germinate

Stored starch to maltose, respiratory substrate for yeast

Produces CO2 and alcohol

Making penicillin

Fermentation of fungus as a batch culture for 6-8 days

Secondary metabolite

Once fermentation is complete, culture is filtered to remove cells

Antibiotics precipitated and purified

Making insulin

Genetic modification of bacteria

| Grown in fermenters, continuous culture

Why is the Sheep C treated w/ hormones

Increase thickness and vascularisation of uterine lining

How can SCNT help save endangered species

Doesn't require fertile females

Female not put at risk during mating

Can subdivide successfully formed embryo

Economic advantages of immobilising enzymes

Reusable so less money required

| Higher temp means profit from faster yield